Meetings 2023

Seminar schedule for Autumn 2023

• Aug 18 Nikolay Oskolkov, NBIS, LU (The attention concept in Deep Learning)
• Sep 15 Thomas Schön, UU (On the state of machine learning research)
• Okt 20 Erik Ylipää, NBIS/AIDA Data hub, LiU (From Graph Neural Networks to Transformers )
• Nov 17 Juliette Griffie, DDLS fellow, SU (How to extract dynamic features from fixed cells images?)
• Dec 15 Abishek Niroula, DDLS fellow, GU (Genomics of clonal hematopoiesis – leveraging DNA sequencing data from population cohorts and biobanks.)

Seminar schedule for Spring 2023

• February 17, Payam Emami, NBIS, Human-centered AI in healthcare
• March 17, Wen Zhong, Linköping University, DDLS fellow Precision Medicine and Diagnostics, Integrative multi-omics for precision medicine
• April 21, Laura Carroll, Laura Carroll, DDLS fellow Epidemiology and Biology of Infection, Umeå University, (Meta)genome mining approaches for novel secondary metabolite discovery
  
• May 10, Dave Zachariah, Div. Systems & Control, Dept. Information Technology, Uppsala University, Uncertainty quantification for clinical decision-making
• June 02, Hazal Koptagel, KTH, Scuphr: A probabilistic framework for cell lineage tree reconstruction

General call for future speaker suggestions

What are we missing?

Maybe you feel that there are interesting subject areas and methodologies we haven't covered yet. The this is your chance to do something about it. Please add your ideas to the lists below!

General ideas

• More about Time series?
• Single-cell applications of integrative methods
• Application of network fusion methods
• ...

Specific methods (e.g., articles)

• Hierarchical Modeling of Species Communities (HMSC) – Bayesian framework for ecological species interactions based on species co-occurrence and other covariates https://besjournals.onlinelibrary.wiley.com/doi/10.1111/2041-210X.12501.

• Genomic structural equation modelling (genomic SEM): a multivariate method for analysing the joint genetic architecture of complex traits https://www.nature.com/articles/s41562-019-0566-x
• ...

Moreover, let us (Olga Dethlefsen ,Bengt Sennblad) know if you have something you would like to present anything on the listed projects or maybe just someting you find interesting in general;  it could be a journal article, a theoretical or applied review of integrative (or other relevant) methods or approaches, some method that you have tested and find interesting or some interesting analysis in your projects. You may also add to the list of proposed subjects on the wiki List of article/subject proposals for AI and IO seminar sessions.