The Swedish Bioinformatics Advisory Program
Grand meeting 2, 2016 (Dec 5-6)

Preparations

For the PhD students

TBA

For the PhD supervisors and advisors

TBA

Practical notes

• The meeting will be at SciLifeLab Uppsala: BMC, Husargatan 3, Uppsala, entrance C11, Navet (E10), ground floor (see map)
• All meals in the schedule are included for free, other meals are covered and organised by the participants.
• Travel and accomodation is payed and organised by the participants.
• There will be a 20-30 min walk down to the city for dinner on Monday,  so bring appropriate clothing
• Phone number (Björn Nystedt) 073-4026231

Schedule

Monday, Dec 5

Room: E10:1308/09

09:30-10.00   Registration, coffee and sandwiches

10.00-10.15  Welcome (Björn)

10.15-11.45  Project status. 10 min sharp by each PhD student. 

Lunch

13.00-15.00   Project feedback sessions.

15.00-15.15   Coffee

15.15-16.15   Project feedback sessions.

16.15-17.30   Social event

17.45-            Dinner

Tuesday, Dec 6

Room: E10:1308/09

09.00-09.15  Intro (Björn)

09.15-10.15  Mix-and-match: Personal consulting in pairs/mini-groups

10.15-10.45 Coffee

10.45 - 12.00 Inspirational talks

• 10X Chromium: Efficient phasing and assembly with Illumina bead-on-a-string reads
• SweRef and SweFreq: A whole genome reference cohort for 1000 Swedes
• Spatial Transcriptomics: In situ global RNA profiling in plant and animal tissues

12.00-13.00   Lunch

13.00-13.30   Summary and diplomas

Suggested feedback groups, Mon 13.15-16.15